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decipher bladder genomic subtyping classifier gsc oligonucleotide microarray assay  (Veracyte Inc)

 
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    Structured Review

    Veracyte Inc decipher bladder genomic subtyping classifier gsc oligonucleotide microarray assay
    Decipher Bladder Genomic Subtyping Classifier Gsc Oligonucleotide Microarray Assay, supplied by Veracyte Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/oligonucleotide+microarray/afirma+classifier+expression+gene/pmc13127185-71-7-20
    Average 86 stars, based on 1 article reviews
    decipher bladder genomic subtyping classifier gsc oligonucleotide microarray assay - by Bioz Stars, 2026-09
    86/100 stars

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    Amplification:

    Article Title: Transcriptome profiling of prostatic tumours from ENACT trial patients with or without enzalutamide.
    Article Snippet: .. RNA was extracted from microdissected tumour samples collected from each patient and at each time point, and then amplified for the Decipher transcriptome-wide oligonucleotide microarray assay in a College of American Pathologists (CAP)/Clinical Laboratory Improvement Amendments (CLIA) laboratory (Veracyte, San Diego, CA, USA). .. Gene-expression signatures were generated using locked models stored in the Decipher Genomic Resource for Intelligent Discovery (GRID) database (Veracyte) [14,15].

    Article Title: Transcriptome profiling of prostatic tumours from ENACT trial patients with or without enzalutamide
    Article Snippet: .. RNA was extracted from microdissected tumour samples collected from each patient and at each time point, and then amplified for the Decipher transcriptome‐wide oligonucleotide microarray assay in a College of American Pathologists (CAP)/Clinical Laboratory Improvement Amendments (CLIA) laboratory (Veracyte, San Diego, CA, USA). .. Gene‐expression signatures were generated using locked models stored in the Decipher Genomic Resource for Intelligent Discovery (GRID) database (Veracyte) [ , ].

    Microarray:

    Article Title: Transcriptome profiling of prostatic tumours from ENACT trial patients with or without enzalutamide.
    Article Snippet: .. RNA was extracted from microdissected tumour samples collected from each patient and at each time point, and then amplified for the Decipher transcriptome-wide oligonucleotide microarray assay in a College of American Pathologists (CAP)/Clinical Laboratory Improvement Amendments (CLIA) laboratory (Veracyte, San Diego, CA, USA). .. Gene-expression signatures were generated using locked models stored in the Decipher Genomic Resource for Intelligent Discovery (GRID) database (Veracyte) [14,15].

    Article Title: Transcriptome profiling of prostatic tumours from ENACT trial patients with or without enzalutamide
    Article Snippet: .. RNA was extracted from microdissected tumour samples collected from each patient and at each time point, and then amplified for the Decipher transcriptome‐wide oligonucleotide microarray assay in a College of American Pathologists (CAP)/Clinical Laboratory Improvement Amendments (CLIA) laboratory (Veracyte, San Diego, CA, USA). .. Gene‐expression signatures were generated using locked models stored in the Decipher Genomic Resource for Intelligent Discovery (GRID) database (Veracyte) [ , ].

    Article Title: Development of an extended version of GALEAS bladder: Detection of FGFR3 fusions in urine and associations between genomic alterations and gene expression
    Article Snippet: .. RNA was extracted from macrodissected FFPE tissues and genome-wide gene expression analysed using the Decipher Bladder Genomic Subtyping Classifier (GSC) oligonucleotide microarray assay in a CAP/CLIA laboratory (Veracyte, Inc San Diego, CA). .. Data were SCAN normalized and FGFR1-4 gene expression was extracted and signatures of FGFR3 co-expressed genes and lncRNA-based FGFR3 activity generated using locked classifiers available in the GRID bioinformatics platform (v3.1, Veracyte, Inc).

    Article Title: The role of HAI-1 in urothelial bladder cancer: Tissue expression, ectodomain shedding and clinical outcomes
    Article Snippet: .. Genome-wide gene expression was analysed using the Decipher Bladder Genomic Subtyping Classifier (GSC) oligonucleotide microarray assay in a CAP/CLIA laboratory (Veracyte, Inc San Diego, CA). .. Statistical tests were carried out using GraphPad Prism (v10.5.0).

    Formalin-fixed Paraffin-Embedded:

    Article Title: Development of an extended version of GALEAS bladder: Detection of FGFR3 fusions in urine and associations between genomic alterations and gene expression
    Article Snippet: .. RNA was extracted from macrodissected FFPE tissues and genome-wide gene expression analysed using the Decipher Bladder Genomic Subtyping Classifier (GSC) oligonucleotide microarray assay in a CAP/CLIA laboratory (Veracyte, Inc San Diego, CA). .. Data were SCAN normalized and FGFR1-4 gene expression was extracted and signatures of FGFR3 co-expressed genes and lncRNA-based FGFR3 activity generated using locked classifiers available in the GRID bioinformatics platform (v3.1, Veracyte, Inc).

    Genome Wide:

    Article Title: Development of an extended version of GALEAS bladder: Detection of FGFR3 fusions in urine and associations between genomic alterations and gene expression
    Article Snippet: .. RNA was extracted from macrodissected FFPE tissues and genome-wide gene expression analysed using the Decipher Bladder Genomic Subtyping Classifier (GSC) oligonucleotide microarray assay in a CAP/CLIA laboratory (Veracyte, Inc San Diego, CA). .. Data were SCAN normalized and FGFR1-4 gene expression was extracted and signatures of FGFR3 co-expressed genes and lncRNA-based FGFR3 activity generated using locked classifiers available in the GRID bioinformatics platform (v3.1, Veracyte, Inc).

    Article Title: The role of HAI-1 in urothelial bladder cancer: Tissue expression, ectodomain shedding and clinical outcomes
    Article Snippet: .. Genome-wide gene expression was analysed using the Decipher Bladder Genomic Subtyping Classifier (GSC) oligonucleotide microarray assay in a CAP/CLIA laboratory (Veracyte, Inc San Diego, CA). .. Statistical tests were carried out using GraphPad Prism (v10.5.0).

    Gene Expression:

    Article Title: Development of an extended version of GALEAS bladder: Detection of FGFR3 fusions in urine and associations between genomic alterations and gene expression
    Article Snippet: .. RNA was extracted from macrodissected FFPE tissues and genome-wide gene expression analysed using the Decipher Bladder Genomic Subtyping Classifier (GSC) oligonucleotide microarray assay in a CAP/CLIA laboratory (Veracyte, Inc San Diego, CA). .. Data were SCAN normalized and FGFR1-4 gene expression was extracted and signatures of FGFR3 co-expressed genes and lncRNA-based FGFR3 activity generated using locked classifiers available in the GRID bioinformatics platform (v3.1, Veracyte, Inc).

    Article Title: The role of HAI-1 in urothelial bladder cancer: Tissue expression, ectodomain shedding and clinical outcomes
    Article Snippet: .. Genome-wide gene expression was analysed using the Decipher Bladder Genomic Subtyping Classifier (GSC) oligonucleotide microarray assay in a CAP/CLIA laboratory (Veracyte, Inc San Diego, CA). .. Statistical tests were carried out using GraphPad Prism (v10.5.0).



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